Release History

Version 0.2.0 (02/04/2026)

Overhauled expDeconv API: new AnnData-based interface (adata_ref, adata_tgt, label_key), automatic raw-counts detection, marker gene selection via topk DE, Leiden spatial clustering, cluster-mean augmentation, score-init warm-start, cluster-to-celltype mapping, JS-divergence loss (wt_js), cosine LR scheduling, and post-hoc calibration.
Added progress reporting: informational print statements at each major phase boundary in expDeconv, plus periodic epoch-level logging in fit_deconv for non-TTY (batch) mode.
Updated expVeloImp with AnnData interface support and proportions recalibration fix.